SCOPe 2.05: Domain d2v3da2: 2v3d A:78-431

Lineage for d2v3da2 (2v3d A:78-431)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.3: beta-glycanases [51487] (27 proteins)
   consist of a number of sequence families

6. Protein Glucosylceramidase, catalytic domain [89473] (1 species)
   acid-beta-glucosidase; glycosyl hydrolase family 30; contains additional beta-domain similar to one found in alpha amylases

7. Species Human (Homo sapiens) [TaxId:9606] [89474] (17 PDB entries)

8. Domain d2v3da2: 2v3d A:78-431 [152446]
   Other proteins in same PDB: d2v3da1, d2v3db1
   automatically matched to d1ogsa2
   complexed with nag, nbv, so4

Details for d2v3da2

PDB Entry: 2v3d, 1.96 Å

PDB Description: acid-beta-glucosidase with n-butyl-deoxynojirimycin

PDB Compounds: (A:) glucosylceramidase

SCOPe Domain Sequences for d2v3da2:

Sequence; same for both SEQRES and ATOM records:

>d2v3da2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vkgfggamtdaaalnilalsppaqnlllksyfseegigyniirvpmascdfsirtytyad
tpddfqlhnfslpeedtklkiplihralqlaqrpvsllaspwtsptwlktngavngkgsl
kgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsagllsgypfqclgftpehqr
dfiardlgptlansthhnvrllmlddqrlllphwakvvltdpeaakyvhgiavhwyldfl
apakatlgethrlfpntmlfaseacvgskfweqsvrlgswdrgmqyshsiitnllyhvvg
wtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfyhlghfskfipegs

Timeline for d2v3da2:

• d2v3da2 first appeared in SCOP 1.75
  
• d2v3da2 appears in SCOPe 2.04
  
• d2v3da2 appears in SCOPe 2.06
  
• d2v3da2 appears in the current release, SCOPe 2.08