Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.72: Ribokinase-like [53612] (3 superfamilies) core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest potential superfamily: members of this fold have similar functions but different ATP-binding sites |
Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (2 families) has extra strand located between strands 1 and 2 |
Family c.72.2.1: MurCDEF [53624] (4 proteins) |
Protein UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53625] (1 species) |
Species Escherichia coli [TaxId:562] [53626] (11 PDB entries) |
Domain d2uupa3: 2uup A:94-297 [152202] Other proteins in same PDB: d2uupa1, d2uupa2 automatically matched to d1e0da3 complexed with lk4, so4 |
PDB Entry: 2uup (more details), 1.88 Å
SCOP Domain Sequences for d2uupa3:
Sequence; same for both SEQRES and ATOM records: (download)
>d2uupa3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} dielfcreaqapivaitgsngkstvttlvgemakaagvnvgvggniglpalmllddecel yvlelssfqlettsslqavaatilnvtedhmdrypfglqqyraaklriyenakvcvvnad daltmpirgadercvsfgvnmgdyhlnhqqgetwlrvkgekvlnvkemklsgqhnytnal aalaladaaglprasslkalttft
Timeline for d2uupa3: