SCOPe 2.08: Domain d2rlda1: 2rld A:1-115

Lineage for d2rlda1 (2rld A:1-115)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.16: IVS-encoded protein-like [158446] (1 family)
   IVS: Intervening sequence with conserved ORF in eubacterial 23S rRNA genes; forms a homopentamer with a toroid-shaped structure containing a tapered central channel
   automatically mapped to Pfam PF05635

5. Family a.29.16.1: IVS-encoded protein-like [158447] (3 proteins)
   Pfam PF05635

6. Protein Uncharacterized protein BT0352 [158450] (1 species)

7. Species Bacteroides thetaiotaomicron [TaxId:818] [158451] (1 PDB entry)
   Uniprot Q8AAW0 1-115

8. Domain d2rlda1: 2rld A:1-115 [152150]
   Other proteins in same PDB: d2rlda2
   complexed with ca, cl, edo

Details for d2rlda1

PDB Entry: 2rld, 1.7 Å

PDB Description: crystal structure of a protein with unknown function from s23 ribosomal protein family (bt_0352) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a resolution

PDB Compounds: (A:) Uncharacterized protein

SCOPe Domain Sequences for d2rlda1:

Sequence, based on SEQRES records:

>d2rlda1 a.29.16.1 (A:1-115) Uncharacterized protein BT0352 {Bacteroides thetaiotaomicron [TaxId: 818]}
mredmkdnvvkdkslefavrivnlykflvneqkefvmskqilrsgtsiganireaeqaqs
radfinklnialkeaneteywlellirteyitreqyesinndsteinkllisiik

Sequence, based on observed residues (ATOM records):

>d2rlda1 a.29.16.1 (A:1-115) Uncharacterized protein BT0352 {Bacteroides thetaiotaomicron [TaxId: 818]}
mredmkdnvvkdkslefavrivnlykflvneqkefvmskqilrsgtsiganireaeqsra
dfinklnialkeaneteywlellirteyitreqyesinndsteinkllisiik

Timeline for d2rlda1:

• d2rlda1 first appeared in SCOP 1.75
  
• d2rlda1 appears in SCOPe 2.07