SCOPe 2.06: Domain d2rita2: 2rit A:64-345

Lineage for d2rita2 (2rit A:64-345)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
   automatically mapped to Pfam PF03414

6. Protein automated matches [190178] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186910] (75 PDB entries)

8. Domain d2rita2: 2rit A:64-345 [152098]
   Other proteins in same PDB: d2rita3
   automated match to d1lz7a_
   complexed with gol

Details for d2rita2

PDB Entry: 2rit, 1.43 Å

PDB Description: unliganded b-specific-1,3-galactosyltransferase (gtb)

PDB Compounds: (A:) Glycoprotein-fucosylgalactoside alpha-galactosyltransferase

SCOPe Domain Sequences for d2rita2:

Sequence, based on SEQRES records:

>d2rita2 c.68.1.9 (A:64-345) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgaykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssrea
ftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavp

Sequence, based on observed residues (ATOM records):

>d2rita2 c.68.1.9 (A:64-345) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgwqdvsmr
rmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftye
rrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdeshln
kyllrhkptkvlspeylwdqqllgwpavlrklrftavp

Timeline for d2rita2:

• d2rita2 first appeared in SCOP 1.75, called d2rita1
  
• d2rita2 was called d2rita_ in SCOPe 2.05
  
• d2rita2 appears in SCOPe 2.07
  
• d2rita2 appears in the current release, SCOPe 2.08