Lineage for d2r7db2 (2r7d B:3-403)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1787538Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 1788689Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 1789724Family b.40.4.16: RNB domain-like [159112] (3 proteins)
    Pfam PF00773; RNase II catalytic domain; decorated OB-fold domain with extra C-terminal structures forming the active site
  6. 1789736Protein Ribonuclease II family protein DR0020 [159115] (1 species)
    Includes extra N-terminal all-alpha subdomain
  7. 1789737Species Deinococcus radiodurans [TaxId:1299] [159116] (2 PDB entries)
    Uniprot Q9RYD0 3-403
  8. 1789739Domain d2r7db2: 2r7d B:3-403 [151632]
    Other proteins in same PDB: d2r7da1, d2r7db1, d2r7dc1
    automated match to d2r7da2
    complexed with mg

Details for d2r7db2

PDB Entry: 2r7d (more details), 1.8 Å

PDB Description: crystal structure of ribonuclease ii family protein from deinococcus radiodurans, triclinic crystal form. northeast structural genomics target drr63
PDB Compounds: (B:) Ribonuclease II family protein

SCOPe Domain Sequences for d2r7db2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2r7db2 b.40.4.16 (B:3-403) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]}
qpeltpaqrtevellargradksrvlrdlklpetpeaahalllrlgvwdeartpyadrlr
aalnavelpvpdfdpaeerldlthlptfaiddegnqdpddavgvedlgggltrlwvhvad
vaalvapdspldlearargatlylpdrtigmlpdelvakaglglhevspalsicldldpd
gnaeavdvlltrvkvqrlayqeaqarleageepfvtlarlarasrrlregegalsidlpe
vrvkadetgasvfplpkpemrtvvqecmtlagwgtaifaddneiplpfatqdyptrevag
dtlpamwarrktlartrfqpspgphhgmgldlyaqatspmrryldlvvhqqlraflagrd
plsskvmaahiaesqmnadatrqaerlsrrhhtlrfiaaqp

SCOPe Domain Coordinates for d2r7db2:

Click to download the PDB-style file with coordinates for d2r7db2.
(The format of our PDB-style files is described here.)

Timeline for d2r7db2: