Lineage for d2r5nb1 (2r5n B:333-527)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (16 species)
    not a true protein
  7. Species Escherichia coli [TaxId:562] [255574] (3 PDB entries)
  8. 2108920Domain d2r5nb1: 2r5n B:333-527 [151594]
    Other proteins in same PDB: d2r5na2, d2r5na3, d2r5na4, d2r5nb2, d2r5nb3, d2r5nb4
    automated match to d2r8oa1
    complexed with ca, edo, r5p, rp5, tpp

Details for d2r5nb1

PDB Entry: 2r5n (more details), 1.6 Å

PDB Description: Crystal structure of transketolase from Escherichia coli in noncovalent complex with acceptor aldose ribose 5-phosphate
PDB Compounds: (B:) Transketolase 1

SCOPe Domain Sequences for d2r5nb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2r5nb1 c.36.1.0 (B:333-527) automated matches {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2r5nb1:

Click to download the PDB-style file with coordinates for d2r5nb1.
(The format of our PDB-style files is described here.)

Timeline for d2r5nb1: