SCOPe 2.06: Domain d2r40d_: 2r40 D:

Lineage for d2r40d_ (2r40 D:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Ecdysone receptor [101436] (1 species)

7. Species Tobacco budworm (Heliothis virescens) [TaxId:7102] [101437] (3 PDB entries)

8. Domain d2r40d_: 2r40 D: [151572]
   Other proteins in same PDB: d2r40a_
   automated match to d1r1kd_
   complexed with 20e, eph, flc, gol, so4

Details for d2r40d_

PDB Entry: 2r40, 2.4 Å

PDB Description: crystal structure of 20e bound ecr/usp

PDB Compounds: (D:) Ecdysone receptor

SCOPe Domain Sequences for d2r40d_:

Sequence, based on SEQRES records:

>d2r40d_ a.123.1.1 (D:) Ecdysone receptor {Tobacco budworm (Heliothis virescens) [TaxId: 7102]}
vppltanqksliarlvwyqegyeqpseedlkrvtqtwqsdeddedsdmpfrqitemtilt
vqlivefakglpgfakisqsdqitllkacssevmmlrvarrydaatdsvlfannqaytrd
nyrkagmayviedllhfcrcmysmmmdnvhyalltaivifsdrpgleqpllveeiqryyl
ntlrvyilnqnsasprcavifgkilgilteirtlgmqnsnmcislklknrklppfleeiw
dva

Sequence, based on observed residues (ATOM records):

>d2r40d_ a.123.1.1 (D:) Ecdysone receptor {Tobacco budworm (Heliothis virescens) [TaxId: 7102]}
vppltanqksliarlvwyqegyeqpseedlkrvtqtdmpfrqitemtiltvqlivefakg
lpgfakisqsdqitllkacssevmmlrvarrydaatdsvlfannqaytrdnyrkagmayv
iedllhfcrcmysmmmdnvhyalltaivifsdrpgleqpllveeiqryylntlrvyilnq
nsasprcavifgkilgilteirtlgmqnsnmcislklknrklppfleeiwdva

Timeline for d2r40d_:

• d2r40d_ first appeared in SCOP 1.75, called d2r40d1
  
• d2r40d_ appears in SCOPe 2.05
  
• d2r40d_ appears in SCOPe 2.07
  
• d2r40d_ appears in the current release, SCOPe 2.08