SCOPe 2.08: Domain d2qwva1: 2qwv A:5-205

Lineage for d2qwva1 (2qwv A:5-205)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.116: alpha/beta knot [75216] (1 superfamily)
   core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot

4. Superfamily c.116.1: alpha/beta knot [75217] (9 families)
   known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
   all known members have dimeric structures

5. Family c.116.1.7: AF1056-like [159518] (2 proteins)
   Pfam PF04013; DUF358

6. Protein Uncharacterized protein VCA1059 [159521] (1 species)

7. Species Vibrio cholerae [TaxId:666] [159522] (1 PDB entry)
   Uniprot Q9KKP3 1-201

8. Domain d2qwva1: 2qwv A:5-205 [151439]
   Other proteins in same PDB: d2qwva2, d2qwvb3
   complexed with acy

Details for d2qwva1

PDB Entry: 2qwv, 2.6 Å

PDB Description: Crystal structure of unknown function protein VCA1059

PDB Compounds: (A:) UPF0217 protein VC_A1059

SCOPe Domain Sequences for d2qwva1:

Sequence, based on SEQRES records:

>d2qwva1 c.116.1.7 (A:5-205) Uncharacterized protein VCA1059 {Vibrio cholerae [TaxId: 666]}
mrsfilrarsaptdsqrlldeiggkchteilahcmmnslftaqshredvvihlvlestrd
ysrtitveaneisdvggfheaaliallvkaldasvgmgkeqtrvvqpgltvrtisfeall
gelaehhslymmdkkgdsirdikigpnpcfiltdhipmpkksgnsmkrlgvekislgpkm
lfasqcvtlihneidhqeagw

Sequence, based on observed residues (ATOM records):

>d2qwva1 c.116.1.7 (A:5-205) Uncharacterized protein VCA1059 {Vibrio cholerae [TaxId: 666]}
mrsfilrarsaptdsqrlldeiggkchteilahcmmnslftaqshredvvihlvlestrd
ysrtitveaneigfheaaliallvkaldasvgmgkeqtrvvqpgltvrtisfeallgela
ehhslymmdkkgdsirdikigpnpcfiltdsmkrlgvekislgpkmlfasqcvtlihnei
dhqeagw

Timeline for d2qwva1:

• d2qwva1 first appeared in SCOP 1.75
  
• d2qwva1 appears in SCOPe 2.07