SCOPe 2.01: Domain d2qwsa_: 2qws A:

Lineage for d2qwsa_ (2qws A:)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families)
   alpha-beta(2)-alpha(2)-beta(3)

5. Family d.110.3.1: PYP-like [55786] (2 proteins)

6. Protein Photoactive yellow protein, PYP [55787] (1 species)

7. Species Methylophilus methylotrophus, strain w3a1 [TaxId:17] [55788] (47 PDB entries)
   Uniprot P16113

8. Domain d2qwsa_: 2qws A: [151438]
   automated match to d1nwza_
   complexed with dod, hc4

Details for d2qwsa_

PDB Entry: 2qws, 2.5 Å

PDB Description: neutron and x-ray structural studies of short hydrogen bonds in photoactive yellow protein (pyp)

PDB Compounds: (A:) Photoactive yellow protein

SCOPe Domain Sequences for d2qwsa_:

Sequence; same for both SEQRES and ATOM records:

>d2qwsa_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Methylophilus methylotrophus, strain w3a1 [TaxId: 17]}
mehvafgsedientlakmddgqldglafgaiqldgdgnilqynaaegditgrdpkqvigk
nffkdvapctdspefygkfkegvasgnlntmfeytfdyqmtptkvkvhmkkalsgdsywv
fvkrv

Timeline for d2qwsa_:

• d2qwsa_ first appeared in SCOP 1.75, called d2qwsa1
  
• d2qwsa_ appears in SCOPe 2.02
  
• d2qwsa_ appears in the current release, SCOPe 2.08