SCOPe 2.05: Domain d2qtva3: 2qtv A:120-390

Lineage for d2qtva3 (2qtv A:120-390)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.62: vWA-like [53299] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.62.1: vWA-like [53300] (6 families)

5. Family c.62.1.2: Trunk domain of Sec23/24 [82458] (2 proteins)
   automatically mapped to Pfam PF04811

6. Protein Sec23 [82459] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82460] (3 PDB entries)

8. Domain d2qtva3: 2qtv A:120-390 [151359]
   Other proteins in same PDB: d2qtva1, d2qtva2, d2qtva4, d2qtva5, d2qtvb_
   automatically matched to d1m2oa3
   complexed with gnp, mg, zn

Details for d2qtva3

PDB Entry: 2qtv, 2.5 Å

PDB Description: structure of sec23-sar1 complexed with the active fragment of sec31

PDB Compounds: (A:) protein transport protein SEC23

SCOPe Domain Sequences for d2qtva3:

Sequence, based on SEQRES records:

>d2qtva3 c.62.1.2 (A:120-390) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
vppifffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrc
nvfrgdreyqlealtemltgqkptgpggaashlpnamnkvtpfslnrfflpleqvefkln
qllenlspdqwsvpaghrplratgsalniaslllqgcyknipariilfasgpgtvapgli
vnselkdplrshhdidsdhaqhykkackfynqiaqrvaanghtvdifagcydqigmsemk
qltdstggvllltdafstaifkqsylrlfak

Sequence, based on observed residues (ATOM records):

>d2qtva3 c.62.1.2 (A:120-390) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
vppifffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrc
nvfrgdreyqlealtemltgqkvtpfslnrfflpleqvefklnqllenlspdqwsvpagh
rplratgsalniaslllqgcyknipariilfasgpgtvapglivnselkdplrshhdids
dhaqhykkackfynqiaqrvaanghtvdifagcydqigmsemkqltdstggvllltdafs
taifkqsylrlfak

Timeline for d2qtva3:

• d2qtva3 first appeared in SCOP 1.75
  
• d2qtva3 appears in SCOPe 2.04
  
• d2qtva3 appears in SCOPe 2.06
  
• d2qtva3 appears in the current release, SCOPe 2.08