Lineage for d2qp1v1 (2qp1 V:1-94)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1132055Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 1132056Superfamily b.53.1: Ribosomal protein L25-like [50715] (2 families) (S)
  5. 1132057Family b.53.1.1: Ribosomal protein L25-like [50716] (2 proteins)
  6. 1132058Protein Ribosomal protein L25 [50717] (1 species)
  7. 1132059Species Escherichia coli [TaxId:562] [50718] (32 PDB entries)
  8. 1132068Domain d2qp1v1: 2qp1 V:1-94 [151191]
    Other proteins in same PDB: d2qp101, d2qp111, d2qp131, d2qp141, d2qp1c1, d2qp1c2, d2qp1d1, d2qp1e1, d2qp1f1, d2qp1g1, d2qp1g2, d2qp1h1, d2qp1h2, d2qp1i1, d2qp1i2, d2qp1j1, d2qp1k1, d2qp1l1, d2qp1m1, d2qp1n1, d2qp1o1, d2qp1p1, d2qp1q1, d2qp1r1, d2qp1s1, d2qp1t1, d2qp1u1, d2qp1w1, d2qp1x1, d2qp1y1, d2qp1z1
    automatically matched to d1b75a_
    protein/RNA complex; complexed with mg, nmy, zn

Details for d2qp1v1

PDB Entry: 2qp1 (more details), 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.
PDB Compounds: (V:) 50S ribosomal protein L25

SCOPe Domain Sequences for d2qp1v1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qp1v1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
ltivvdgkeikvkaqdvqrhpykpklqhidfvra

SCOPe Domain Coordinates for d2qp1v1:

Click to download the PDB-style file with coordinates for d2qp1v1.
(The format of our PDB-style files is described here.)

Timeline for d2qp1v1: