Lineage for d2qp1r1 (2qp1 R:1-103)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1143034Fold b.155: L21p-like [141090] (1 superfamily)
    core: sandwich, 6 strands in 2 sheets
  4. 1143035Superfamily b.155.1: L21p-like [141091] (1 family) (S)
  5. 1143036Family b.155.1.1: Ribosomal protein L21p [141092] (1 protein)
    Pfam PF00829
  6. 1143037Protein Ribosomal protein L21p [141093] (3 species)
  7. 1143045Species Escherichia coli [TaxId:562] [141094] (27 PDB entries)
    Uniprot P0AG48 1-103
  8. 1143053Domain d2qp1r1: 2qp1 R:1-103 [151187]
    Other proteins in same PDB: d2qp101, d2qp111, d2qp131, d2qp141, d2qp1c1, d2qp1c2, d2qp1d1, d2qp1e1, d2qp1f1, d2qp1g1, d2qp1g2, d2qp1h1, d2qp1h2, d2qp1i1, d2qp1i2, d2qp1j1, d2qp1k1, d2qp1l1, d2qp1m1, d2qp1n1, d2qp1o1, d2qp1p1, d2qp1q1, d2qp1s1, d2qp1t1, d2qp1u1, d2qp1v1, d2qp1w1, d2qp1x1, d2qp1y1, d2qp1z1
    automatically matched to d1vs6r1
    protein/RNA complex; complexed with mg, nmy, zn

Details for d2qp1r1

PDB Entry: 2qp1 (more details), 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.
PDB Compounds: (R:) 50S ribosomal protein L21

SCOPe Domain Sequences for d2qp1r1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qp1r1 b.155.1.1 (R:1-103) Ribosomal protein L21p {Escherichia coli [TaxId: 562]}
myavfqsggkqhrvsegqtvrlekldiatgetvefaevlmiangeevkigvpfvdggvik
aevvahgrgekvkivkfrrrkhyrkqqghrqwftdvkitgisa

SCOPe Domain Coordinates for d2qp1r1:

Click to download the PDB-style file with coordinates for d2qp1r1.
(The format of our PDB-style files is described here.)

Timeline for d2qp1r1: