Lineage for d2qp1m1 (2qp1 M:1-136)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2168779Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2169032Superfamily d.41.4: Ribosomal protein L16p/L10e [54686] (2 families) (S)
  5. 2169097Family d.41.4.2: Ribosomal protein L16p [117888] (1 protein)
    Pfam PF00252
  6. 2169098Protein Ribosomal protein L16p [117889] (4 species)
  7. 2169106Species Escherichia coli [TaxId:562] [143200] (29 PDB entries)
    Uniprot P0ADY7 1-136
  8. 2169114Domain d2qp1m1: 2qp1 M:1-136 [151182]
    Other proteins in same PDB: d2qp101, d2qp111, d2qp131, d2qp141, d2qp1c1, d2qp1c2, d2qp1d1, d2qp1e1, d2qp1f1, d2qp1g1, d2qp1g2, d2qp1h1, d2qp1h2, d2qp1i1, d2qp1i2, d2qp1j1, d2qp1k1, d2qp1l1, d2qp1n1, d2qp1o1, d2qp1p1, d2qp1q1, d2qp1r1, d2qp1s1, d2qp1t1, d2qp1u1, d2qp1v1, d2qp1w1, d2qp1x1, d2qp1y1, d2qp1z1
    protein/RNA complex; complexed with mg, nmy, zn
    protein/RNA complex; complexed with mg, nmy, zn

Details for d2qp1m1

PDB Entry: 2qp1 (more details), 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.
PDB Compounds: (M:) 50S ribosomal protein L16

SCOPe Domain Sequences for d2qp1m1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qp1m1 d.41.4.2 (M:1-136) Ribosomal protein L16p {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2qp1m1:

Click to download the PDB-style file with coordinates for d2qp1m1.
(The format of our PDB-style files is described here.)

Timeline for d2qp1m1: