SCOPe 2.07: Domain d2qp1h1: 2qp1 H:59-149

Lineage for d2qp1h1 (2qp1 H:59-149)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.99: Ribosomal protein L9 C-domain [55652] (1 superfamily)
   alpha-beta-alpha(2)-beta(2); 2 layers: alpha/beta

4. Superfamily d.99.1: Ribosomal protein L9 C-domain [55653] (1 family)
   automatically mapped to Pfam PF03948

5. Family d.99.1.1: Ribosomal protein L9 C-domain [55654] (1 protein)

6. Protein Ribosomal protein L9 C-domain [55655] (3 species)

7. Species Escherichia coli [TaxId:562] [160580] (29 PDB entries)
   Uniprot P0A7R1 59-149

8. Domain d2qp1h1: 2qp1 H:59-149 [151175]
   Other proteins in same PDB: d2qp101, d2qp111, d2qp131, d2qp141, d2qp1c1, d2qp1c2, d2qp1d1, d2qp1e1, d2qp1f1, d2qp1g1, d2qp1g2, d2qp1h2, d2qp1i1, d2qp1i2, d2qp1j1, d2qp1k1, d2qp1l1, d2qp1m1, d2qp1n1, d2qp1o1, d2qp1p1, d2qp1q1, d2qp1r1, d2qp1s1, d2qp1t1, d2qp1u1, d2qp1v1, d2qp1w1, d2qp1x1, d2qp1y1, d2qp1z1
   protein/RNA complex; complexed with mg, nmy, zn
   protein/RNA complex; complexed with mg, nmy, zn

Details for d2qp1h1

PDB Entry: 2qp1, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (H:) 50S ribosomal protein L9

SCOPe Domain Sequences for d2qp1h1:

Sequence; same for both SEQRES and ATOM records:

>d2qp1h1 d.99.1.1 (H:59-149) Ribosomal protein L9 C-domain {Escherichia coli [TaxId: 562]}
aevlaaanaraekinaletvtiaskagdegklfgsigtrdiadavtaagvevaksevrlp
ngvlrttgehevsfqvhsevfakvivnvvae

Timeline for d2qp1h1:

• d2qp1h1 first appeared in SCOP 1.75
  
• d2qp1h1 appears in SCOPe 2.06
  
• d2qp1h1 appears in the current release, SCOPe 2.08