SCOPe 2.07: Domain d2qp0m1: 2qp0 M:1-113

Lineage for d2qp0m1 (2qp0 M:1-113)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.156: S13-like H2TH domain [81297] (1 superfamily)
   core: 3-4 helices

4. Superfamily a.156.1: S13-like H2TH domain [46946] (4 families)
   contains a helix-two turns-helix (H2TH) motif

5. Family a.156.1.1: Ribosomal protein S13 [46947] (1 protein)
   contains 3 helices and a beta-hairpin in the core and a non-globular C-terminal extension
   automatically mapped to Pfam PF00416

6. Protein Ribosomal protein S13 [46948] (2 species)

7. Species Escherichia coli [TaxId:562] [158360] (26 PDB entries)
   Uniprot P0A7S9 1-114

8. Domain d2qp0m1: 2qp0 M:1-113 [151156]
   Other proteins in same PDB: d2qp0b1, d2qp0c1, d2qp0c2, d2qp0d1, d2qp0e1, d2qp0e2, d2qp0f1, d2qp0g1, d2qp0h1, d2qp0i1, d2qp0j1, d2qp0k1, d2qp0l1, d2qp0n1, d2qp0p1, d2qp0q1, d2qp0r1, d2qp0s1, d2qp0t1, d2qp0u1
   protein/RNA complex; complexed with mg, nmy, scm
   protein/RNA complex; complexed with mg, nmy, scm

Details for d2qp0m1

PDB Entry: 2qp0, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. This file contains the 30S subunit of the second 70S ribosome, with spectinomycin and neomycin bound. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (M:) 30S ribosomal protein S13

SCOPe Domain Sequences for d2qp0m1:

Sequence; same for both SEQRES and ATOM records:

>d2qp0m1 a.156.1.1 (M:1-113) Ribosomal protein S13 {Escherichia coli [TaxId: 562]}
ariaginipdhkhavialtsiygvgktrskailaaagiaedvkiselsegqidtlrdeva
kfvvegdlrreismsikrlmdlgcyrglrhrrglpvrgqrtktnartrkgprk

Timeline for d2qp0m1:

• d2qp0m1 first appeared in SCOP 1.75
  
• d2qp0m1 appears in SCOPe 2.06
  
• d2qp0m1 appears in the current release, SCOPe 2.08