Lineage for d2qbkw1 (2qbk W:6-84)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1560127Fold b.84: Barrel-sandwich hybrid [51229] (4 superfamilies)
    sandwich of half-barrel shaped beta-sheets
  4. 1560426Superfamily b.84.4: Ribosomal L27 protein-like [110324] (3 families) (S)
    rudiment single hybrid fold with a permuted topology
  5. 1560427Family b.84.4.1: Ribosomal L27 protein [110325] (1 protein)
    Pfam PF01016
  6. 1560428Protein Ribosomal protein L27 [110326] (3 species)
  7. 1560437Species Escherichia coli [TaxId:562] [159322] (29 PDB entries)
    Uniprot P0A7L8 1-84
  8. 1560454Domain d2qbkw1: 2qbk W:6-84 [150645]
    Other proteins in same PDB: d2qbk01, d2qbk11, d2qbk31, d2qbk41, d2qbk61, d2qbkc1, d2qbkc2, d2qbkd1, d2qbke1, d2qbkf1, d2qbkg1, d2qbkg2, d2qbkh1, d2qbkh2, d2qbki1, d2qbki2, d2qbkj1, d2qbkk1, d2qbkl1, d2qbkm1, d2qbkn1, d2qbko1, d2qbkp1, d2qbkq1, d2qbkr1, d2qbks1, d2qbkt1, d2qbku1, d2qbkv1, d2qbkx1, d2qbky1, d2qbkz1
    automatically matched to 2AW4 W:1-84
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbkw1

PDB Entry: 2qbk (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (W:) 50S ribosomal protein L27

SCOPe Domain Sequences for d2qbkw1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbkw1 b.84.4.1 (W:6-84) Ribosomal protein L27 {Escherichia coli [TaxId: 562]}
ggstrngrdseakrlgvkrfggesvlagsiivrqrgtkfhaganvgcgrdhtlfakadgk
vkfevkgpknrkfisieae

SCOPe Domain Coordinates for d2qbkw1:

Click to download the PDB-style file with coordinates for d2qbkw1.
(The format of our PDB-style files is described here.)

Timeline for d2qbkw1: