Lineage for d2qbkr1 (2qbk R:1-103)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1143034Fold b.155: L21p-like [141090] (1 superfamily)
    core: sandwich, 6 strands in 2 sheets
  4. 1143035Superfamily b.155.1: L21p-like [141091] (1 family) (S)
  5. 1143036Family b.155.1.1: Ribosomal protein L21p [141092] (1 protein)
    Pfam PF00829
  6. 1143037Protein Ribosomal protein L21p [141093] (3 species)
  7. 1143045Species Escherichia coli [TaxId:562] [141094] (27 PDB entries)
    Uniprot P0AG48 1-103
  8. 1143062Domain d2qbkr1: 2qbk R:1-103 [150640]
    Other proteins in same PDB: d2qbk01, d2qbk11, d2qbk31, d2qbk41, d2qbk61, d2qbkc1, d2qbkc2, d2qbkd1, d2qbke1, d2qbkf1, d2qbkg1, d2qbkg2, d2qbkh1, d2qbkh2, d2qbki1, d2qbki2, d2qbkj1, d2qbkk1, d2qbkl1, d2qbkm1, d2qbkn1, d2qbko1, d2qbkp1, d2qbkq1, d2qbks1, d2qbkt1, d2qbku1, d2qbkv1, d2qbkw1, d2qbkx1, d2qbky1, d2qbkz1
    automatically matched to d1vs6r1
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbkr1

PDB Entry: 2qbk (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (R:) 50S ribosomal protein L21

SCOPe Domain Sequences for d2qbkr1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbkr1 b.155.1.1 (R:1-103) Ribosomal protein L21p {Escherichia coli [TaxId: 562]}
myavfqsggkqhrvsegqtvrlekldiatgetvefaevlmiangeevkigvpfvdggvik
aevvahgrgekvkivkfrrrkhyrkqqghrqwftdvkitgisa

SCOPe Domain Coordinates for d2qbkr1:

Click to download the PDB-style file with coordinates for d2qbkr1.
(The format of our PDB-style files is described here.)

Timeline for d2qbkr1: