Lineage for d2qbk11 (2qbk 1:3-52)

  1. Root: SCOPe 2.02
  2. 1248417Class i: Low resolution protein structures [58117] (25 folds)
  3. 1248418Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 1248419Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 1248420Family i.1.1.1: Ribosome complexes [58120] (1 protein)
  6. 1248421Protein 70S ribosome functional complex [58121] (9 species)
  7. 1248493Species Escherichia coli [TaxId:562] [58123] (72 PDB entries)
  8. 1248535Domain d2qbk11: 2qbk 1:3-52 [150617]
    Other proteins in same PDB: d2qbk01, d2qbk31, d2qbk41, d2qbk61, d2qbkc1, d2qbkc2, d2qbkd1, d2qbke1, d2qbkf1, d2qbkg1, d2qbkg2, d2qbkh1, d2qbkh2, d2qbki1, d2qbki2, d2qbkj1, d2qbkk1, d2qbkl1, d2qbkm1, d2qbkn1, d2qbko1, d2qbkq1, d2qbkr1, d2qbks1, d2qbkt1, d2qbku1, d2qbkv1, d2qbkw1, d2qbkx1, d2qbky1, d2qbkz1
    automatically matched to d1p851_
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbk11

PDB Entry: 2qbk (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (1:) 50S ribosomal protein L33

SCOPe Domain Sequences for d2qbk11:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbk11 i.1.1.1 (1:3-52) 70S ribosome functional complex {Escherichia coli [TaxId: 562]}
girekiklvssagtghfytttknkrtkpeklelkkfdpvvrqhviykeak

SCOPe Domain Coordinates for d2qbk11:

Click to download the PDB-style file with coordinates for d2qbk11.
(The format of our PDB-style files is described here.)

Timeline for d2qbk11: