Lineage for d2qbiu1 (2qbi U:1-102)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2053585Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2054645Superfamily b.34.5: Translation proteins SH3-like domain [50104] (8 families) (S)
    many known members contain KOW motif
  5. 2054646Family b.34.5.1: Ribosomal proteins L24p and L21e [50105] (2 proteins)
  6. 2054689Protein Ribosomal proteins L24 (L24p) [50106] (4 species)
  7. 2054698Species Escherichia coli [TaxId:562] [141241] (30 PDB entries)
    Uniprot P60624 1-102
  8. 2054717Domain d2qbiu1: 2qbi U:1-102 [150589]
    Other proteins in same PDB: d2qbi01, d2qbi11, d2qbi31, d2qbi41, d2qbi61, d2qbic1, d2qbic2, d2qbid1, d2qbie1, d2qbif1, d2qbig1, d2qbig2, d2qbih1, d2qbih2, d2qbii1, d2qbii2, d2qbij1, d2qbik1, d2qbil1, d2qbim1, d2qbin1, d2qbio1, d2qbip1, d2qbiq1, d2qbir1, d2qbis1, d2qbit1, d2qbiv1, d2qbiw1, d2qbix1, d2qbiy1, d2qbiz1
    protein/RNA complex; complexed with lll, mg, zn
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbiu1

PDB Entry: 2qbi (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (U:) 50S ribosomal protein L24

SCOPe Domain Sequences for d2qbiu1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbiu1 b.34.5.1 (U:1-102) Ribosomal proteins L24 (L24p) {Escherichia coli [TaxId: 562]}
aakirrddevivltgkdkgkrgkvknvlssgkviveginlvkkhqkpvpalnqpggivek
eaaiqvsnvaifnaatgkadrvgfrfedgkkvrffksnseti

SCOPe Domain Coordinates for d2qbiu1:

Click to download the PDB-style file with coordinates for d2qbiu1.
(The format of our PDB-style files is described here.)

Timeline for d2qbiu1: