Lineage for d2qbi11 (2qbi 1:3-52)

  1. Root: SCOPe 2.05
  2. 1970697Class i: Low resolution protein structures [58117] (25 folds)
  3. 1970698Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 1970699Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 1970700Family i.1.1.1: Ribosome complexes [58120] (3 proteins)
  6. 1970701Protein 70S ribosome functional complex [58121] (4 species)
  7. 1970702Species Escherichia coli [TaxId:562] [58123] (72 PDB entries)
  8. 1970743Domain d2qbi11: 2qbi 1:3-52 [150563]
    Other proteins in same PDB: d2qbi01, d2qbi31, d2qbi41, d2qbi61, d2qbic1, d2qbic2, d2qbid1, d2qbie1, d2qbif1, d2qbig1, d2qbig2, d2qbih1, d2qbih2, d2qbii1, d2qbii2, d2qbij1, d2qbik1, d2qbil1, d2qbim1, d2qbin1, d2qbio1, d2qbiq1, d2qbir1, d2qbis1, d2qbit1, d2qbiu1, d2qbiv1, d2qbiw1, d2qbix1, d2qbiy1, d2qbiz1
    protein/RNA complex; complexed with lll, mg, zn
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbi11

PDB Entry: 2qbi (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (1:) 50S ribosomal protein L33

SCOPe Domain Sequences for d2qbi11:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbi11 i.1.1.1 (1:3-52) 70S ribosome functional complex {Escherichia coli [TaxId: 562]}
girekiklvssagtghfytttknkrtkpeklelkkfdpvvrqhviykeak

SCOPe Domain Coordinates for d2qbi11:

Click to download the PDB-style file with coordinates for d2qbi11.
(The format of our PDB-style files is described here.)

Timeline for d2qbi11: