Lineage for d2qbgv1 (2qbg V:1-94)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2802937Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 2802938Superfamily b.53.1: Ribosomal protein L25-like [50715] (3 families) (S)
  5. 2802939Family b.53.1.1: Ribosomal protein L25-like [50716] (2 proteins)
  6. 2802940Protein Ribosomal protein L25 [50717] (1 species)
  7. 2802941Species Escherichia coli [TaxId:562] [50718] (32 PDB entries)
  8. 2802946Domain d2qbgv1: 2qbg V:1-94 [150536]
    Other proteins in same PDB: d2qbg01, d2qbg11, d2qbg31, d2qbg41, d2qbg61, d2qbgc1, d2qbgc2, d2qbgd1, d2qbge1, d2qbgf1, d2qbgg1, d2qbgg2, d2qbgh1, d2qbgh2, d2qbgi1, d2qbgi2, d2qbgj1, d2qbgk1, d2qbgl1, d2qbgm1, d2qbgn1, d2qbgo1, d2qbgp1, d2qbgq1, d2qbgr1, d2qbgs1, d2qbgt1, d2qbgu1, d2qbgw1, d2qbgx1, d2qbgy1, d2qbgz1
    protein/RNA complex; complexed with mg, zn
    protein/RNA complex; complexed with mg, zn

Details for d2qbgv1

PDB Entry: 2qbg (more details), 3.3 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (V:) 50S ribosomal protein L25

SCOPe Domain Sequences for d2qbgv1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbgv1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
ltivvdgkeikvkaqdvqrhpykpklqhidfvra

SCOPe Domain Coordinates for d2qbgv1:

Click to download the PDB-style file with coordinates for d2qbgv1.
(The format of our PDB-style files is described here.)

Timeline for d2qbgv1: