SCOPe 2.04: Domain d2qbgs1: 2qbg S:1-110

Lineage for d2qbgs1 (2qbg S:1-110)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.55: Ribosomal protein L22 [54842] (1 superfamily)
   beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation

4. Superfamily d.55.1: Ribosomal protein L22 [54843] (1 family)
   some topological similarity to prokaryotic ribosomal protein L17

5. Family d.55.1.1: Ribosomal protein L22 [54844] (1 protein)

6. Protein Ribosomal protein L22 [54845] (5 species)

7. Species Escherichia coli [TaxId:562] [160266] (29 PDB entries)
   Uniprot P61175 1-110

8. Domain d2qbgs1: 2qbg S:1-110 [150533]
   Other proteins in same PDB: d2qbg01, d2qbg11, d2qbg31, d2qbg41, d2qbg61, d2qbgc1, d2qbgc2, d2qbgd1, d2qbge1, d2qbgf1, d2qbgg1, d2qbgg2, d2qbgh1, d2qbgh2, d2qbgi1, d2qbgi2, d2qbgj1, d2qbgk1, d2qbgl1, d2qbgm1, d2qbgn1, d2qbgo1, d2qbgp1, d2qbgq1, d2qbgr1, d2qbgt1, d2qbgu1, d2qbgv1, d2qbgw1, d2qbgx1, d2qbgy1, d2qbgz1
   automatically matched to 2AW4 S:1-110
   protein/RNA complex; complexed with mg, zn

Details for d2qbgs1

PDB Entry: 2qbg, 3.3 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (S:) 50S ribosomal protein L22

SCOPe Domain Sequences for d2qbgs1:

Sequence; same for both SEQRES and ATOM records:

>d2qbgs1 d.55.1.1 (S:1-110) Ribosomal protein L22 {Escherichia coli [TaxId: 562]}
metiakhrharssaqkvrlvadlirgkkvsqaldiltytnkkaavlvkkvlesaianaeh
ndgadiddlkvtkifvdegpsmkrimprakgradrilkrtshitvvvsdr

Timeline for d2qbgs1:

• d2qbgs1 first appeared in SCOP 1.75
  
• d2qbgs1 appears in SCOPe 2.03
  
• d2qbgs1 appears in SCOPe 2.05
  
• d2qbgs1 appears in the current release, SCOPe 2.08