SCOPe 2.04: Domain d2qbbu1: 2qbb U:3-53

Lineage for d2qbbu1 (2qbb U:3-53)

1. Root: SCOPe 2.04

2. Class j: Peptides [58231] (126 folds)

3. Fold j.122: Ribosomal protein S21p [161307] (1 superfamily)
   non-globular, mainly alpha-helical

4. Superfamily j.122.1: Ribosomal protein S21p [161308] (1 family)

5. Family j.122.1.1: Ribosomal protein S21p [161309] (1 protein)
   Pfam PF01165

6. Protein Ribosomal protein S21, RpsU [161310] (1 species)

7. Species Escherichia coli [TaxId:562] [161311] (24 PDB entries)
   Uniprot P68679 4-54

8. Domain d2qbbu1: 2qbb U:3-53 [150400]
   Other proteins in same PDB: d2qbbb1, d2qbbc1, d2qbbc2, d2qbbd1, d2qbbe1, d2qbbe2, d2qbbf1, d2qbbg1, d2qbbh1, d2qbbi1, d2qbbj1, d2qbbk1, d2qbbl1, d2qbbm1, d2qbbn1, d2qbbp1, d2qbbq1, d2qbbr1, d2qbbs1, d2qbbt1
   automatically matched to 2AVY U:3-53
   protein/RNA complex; complexed with lll, mg

Details for d2qbbu1

PDB Entry: 2qbb, 3.54 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 30S subunit of the second 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (U:) 30S ribosomal protein S21

SCOPe Domain Sequences for d2qbbu1:

Sequence; same for both SEQRES and ATOM records:

>d2qbbu1 j.122.1.1 (U:3-53) Ribosomal protein S21, RpsU {Escherichia coli [TaxId: 562]}
ikvrenepfdvalrrfkrscekagvlaevrrrefyekptterkrakasavk

Timeline for d2qbbu1:

• d2qbbu1 first appeared in SCOP 1.75
  
• d2qbbu1 appears in SCOPe 2.03
  
• d2qbbu1 appears in SCOPe 2.05
  
• d2qbbu1 appears in the current release, SCOPe 2.08