Lineage for d2qaod1 (2qao D:1-209)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 801216Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
    barrel, closed; n=6, S=10; greek-key
  4. 801236Superfamily b.43.3: Translation proteins [50447] (6 families) (S)
  5. 801391Family b.43.3.2: Ribosomal protein L3 [50461] (1 protein)
  6. 801392Protein Ribosomal protein L3 [50462] (4 species)
    superfamily fold is elaborated with additional structures
  7. 801462Species Escherichia coli [TaxId:562] [159159] (29 PDB entries)
    Uniprot P60438 1-209
  8. 801466Domain d2qaod1: 2qao D:1-209 [150294]
    Other proteins in same PDB: d2qao01, d2qao11, d2qao31, d2qao41, d2qaoc1, d2qaoc2, d2qaoe1, d2qaof1, d2qaog1, d2qaog2, d2qaoh1, d2qaoh2, d2qaoi1, d2qaoi2, d2qaoj1, d2qaok1, d2qaol1, d2qaom1, d2qaon1, d2qaoo1, d2qaop1, d2qaoq1, d2qaor1, d2qaos1, d2qaot1, d2qaou1, d2qaov1, d2qaow1, d2qaox1, d2qaoy1, d2qaoz1
    automatically matched to 2AW4 D:1-209
    complexed with mg, nmy, zn

Details for d2qaod1

PDB Entry: 2qao (more details), 3.21 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. This file contains the 50S subunit of the second 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (D:) 50S ribosomal protein L3

SCOP Domain Sequences for d2qaod1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qaod1 b.43.3.2 (D:1-209) Ribosomal protein L3 {Escherichia coli [TaxId: 562]}
miglvgkkvgmtriftedgvsipvtvieveanrvtqvkdlandgyraiqvttgakkanrv
tkpeaghfakagveagrglwefrlaegeeftvgqsisvelfadvkkvdvtgtskgkgfag
tvkrwnfrtqdathgnslshrvpgsigqnqtpgkvfkgkkmagqmgnervtvqsldvvrv
daernlllvkgavpgatgsdlivkpavka

SCOP Domain Coordinates for d2qaod1:

Click to download the PDB-style file with coordinates for d2qaod1.
(The format of our PDB-style files is described here.)

Timeline for d2qaod1: