SCOP 1.75: Domain d2qamj1: 2qam J:1-140

Lineage for d2qamj1 (2qam J:1-140)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.21: Ribosomal protein L13 [52160] (1 superfamily)
   3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 3214

4. Superfamily c.21.1: Ribosomal protein L13 [52161] (1 family)

5. Family c.21.1.1: Ribosomal protein L13 [52162] (1 protein)

6. Protein Ribosomal protein L13 [52163] (5 species)
   synonym: 50S ribosomal protein L13p, HMAL13

7. Species Escherichia coli [TaxId:562] [159474] (29 PDB entries)
   Uniprot P02410 1-140

8. Domain d2qamj1: 2qam J:1-140 [150250]
   Other proteins in same PDB: d2qam01, d2qam11, d2qam21, d2qam31, d2qam41, d2qamc1, d2qamc2, d2qamd1, d2qame1, d2qamf1, d2qamg1, d2qamg2, d2qamh1, d2qamh2, d2qami1, d2qami2, d2qamk1, d2qaml1, d2qamm1, d2qamn1, d2qamo1, d2qamp1, d2qamq1, d2qamr1, d2qams1, d2qamt1, d2qamu1, d2qamv1, d2qamw1, d2qamx1, d2qamy1, d2qamz1
   automatically matched to 2AW4 J:1-140
   complexed with mg, nmy, zn

Details for d2qamj1

PDB Entry: 2qam, 3.21 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. This file contains the 50S subunit of the first 70S ribosome, with neomycin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (J:) 50S ribosomal protein L13

SCOP Domain Sequences for d2qamj1:

Sequence; same for both SEQRES and ATOM records:

>d2qamj1 c.21.1.1 (J:1-140) Ribosomal protein L13 {Escherichia coli [TaxId: 562]}
mktftakpetvkrdwyvvdatgktlgrlatelarrlrgkhkaeytphvdtgdyiivlnad
kvavtgnkrtdkvyyhhtghiggikqatfeemiarrpervieiavkgmlpkgplgramfr
klkvyagnehnhaaqqpqvl

Timeline for d2qamj1:

• d2qamj1 is new in SCOP 1.75
  
• d2qamj1 appears in SCOPe 2.01
  
• d2qamj1 appears in the current release, SCOPe 2.08