SCOPe 2.08: Domain d2q5pb_: 2q5p B:

Lineage for d2q5pb_ (2q5p B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator activated receptor gamma, PPAR-gamma [48524] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48525] (172 PDB entries)
   Uniprot P37231 232-505

8. Domain d2q5pb_: 2q5p B: [150052]
   automated match to d1wm0x_
   complexed with 241

Details for d2q5pb_

PDB Entry: 2q5p, 2.3 Å

PDB Description: crystal structure of ppargamma bound to partial agonist mrl24

PDB Compounds: (B:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d2q5pb_:

Sequence, based on SEQRES records:

>d2q5pb_ a.123.1.1 (B:) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkh
itplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheii
ytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlai
fiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqiv
tehvqllqvikktetdmslhpllqeiykd

Sequence, based on observed residues (ATOM records):

>d2q5pb_ a.123.1.1 (B:) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
esadlralakhlydsyiksfpltkakarailtgkspfviydmnslmmgefkhitvairif
qgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlis
egqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpglln
vkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvilhpllq
eiykd

Timeline for d2q5pb_:

• d2q5pb_ first appeared in SCOP 1.75, called d2q5pb1
  
• d2q5pb_ appears in SCOPe 2.07