Lineage for d2pzsb1 (2pzs B:5-187)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2460924Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2462855Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2463460Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 protein domains)
    contains Pfam PF00929
  6. 2463625Protein Exonuclease domain of phi29 DNA polymerase [117650] (1 species)
  7. 2463626Species Bacteriophage phi-29 [TaxId:10756] [117651] (8 PDB entries)
    Uniprot P03680
  8. 2463639Domain d2pzsb1: 2pzs B:5-187 [149967]
    Other proteins in same PDB: d2pzsa2, d2pzsb2, d2pzsc2, d2pzsd2
    automated match to d1xhxa1
    protein/DNA complex

Details for d2pzsb1

PDB Entry: 2pzs (more details), 2.6 Å

PDB Description: Phi29 DNA polymerase complexed with primer-template DNA (post-translocation binary complex)
PDB Compounds: (B:) DNA polymerase

SCOPe Domain Sequences for d2pzsb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2pzsb1 c.55.3.5 (B:5-187) Exonuclease domain of phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]}

SCOPe Domain Coordinates for d2pzsb1:

Click to download the PDB-style file with coordinates for d2pzsb1.
(The format of our PDB-style files is described here.)

Timeline for d2pzsb1: