SCOPe 2.06: Domain d2pw9b_: 2pw9 B:

Lineage for d2pw9b_ (2pw9 B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families)
   contains extra C-terminal strand 5, order 21345

5. Family c.97.1.5: FdhD/NarQ [159821] (1 protein)
   Pfam PF02634; contains extra N-terminal beta-hairpin arm, involved in dimerization, and an alpha+beta subdomain of beta-grasp fold (54235)

6. Protein Uncharacterized protein DP1777 [159822] (1 species)
   Related to formate dehydrogenase accessory protein FdhD

7. Species Desulfotalea psychrophila [TaxId:84980] [159823] (1 PDB entry)
   Uniprot Q6AMB9 7-257

8. Domain d2pw9b_: 2pw9 B: [149897]
   automated match to d2pw9a1
   complexed with so4

Details for d2pw9b_

PDB Entry: 2pw9, 2.1 Å

PDB Description: crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila

PDB Compounds: (B:) Putative formate dehydrogenase accessory protein

SCOPe Domain Sequences for d2pw9b_:

Sequence, based on SEQRES records:

>d2pw9b_ c.97.1.5 (B:) Uncharacterized protein DP1777 {Desulfotalea psychrophila [TaxId: 84980]}
plsimqksvvirpggrqemdehvaietpyaialndrvigssmvlpvdleefgagflfgqg
yikkaeeireilvcpqgrisvyadveneepreviitsgcggtgkipkemlegefaplady
clpfaeiksfirealhssplgpqthcvhgcglwnngrlqvyhedvgrhnavdkvlgsill
grasnnsavyttgrltsdmvlkcarigipiimsrtspsslglalakrsgatlvaysrper
invfnaperil

Sequence, based on observed residues (ATOM records):

>d2pw9b_ c.97.1.5 (B:) Uncharacterized protein DP1777 {Desulfotalea psychrophila [TaxId: 84980]}
plsimqksvvirpggrqemdehvaietpyaialndrvigssmvlpvdleefgagflfgqg
yikkaeeireilvcpqgrisvyadkipkemlefapladyclpfaeiksfirealhssplg
pqthcvhgcglwnngrlqvyhedvgrhnavdkvlgsillgrasnnsavyttgrltsdmvl
kcarigipiimsrtspsslglalakrsgatlvaysrperinvfnaperil

Timeline for d2pw9b_:

• d2pw9b_ first appeared in SCOP 1.75, called d2pw9b1
  
• d2pw9b_ appears in SCOPe 2.05
  
• d2pw9b_ appears in SCOPe 2.07
  
• d2pw9b_ appears in the current release, SCOPe 2.08