Lineage for d2pw9a1 (2pw9 A:7-257)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2918481Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2918482Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2918711Family c.97.1.5: FdhD/NarQ [159821] (1 protein)
    Pfam PF02634; contains extra N-terminal beta-hairpin arm, involved in dimerization, and an alpha+beta subdomain of beta-grasp fold (54235)
  6. 2918712Protein Uncharacterized protein DP1777 [159822] (1 species)
    Related to formate dehydrogenase accessory protein FdhD
  7. 2918713Species Desulfotalea psychrophila [TaxId:84980] [159823] (1 PDB entry)
    Uniprot Q6AMB9 7-257
  8. 2918714Domain d2pw9a1: 2pw9 A:7-257 [149896]
    complexed with so4

Details for d2pw9a1

PDB Entry: 2pw9 (more details), 2.1 Å

PDB Description: crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila
PDB Compounds: (A:) Putative formate dehydrogenase accessory protein

SCOPe Domain Sequences for d2pw9a1:

Sequence, based on SEQRES records: (download)

>d2pw9a1 c.97.1.5 (A:7-257) Uncharacterized protein DP1777 {Desulfotalea psychrophila [TaxId: 84980]}
plsimqksvvirpggrqemdehvaietpyaialndrvigssmvlpvdleefgagflfgqg
yikkaeeireilvcpqgrisvyadveneepreviitsgcggtgkipkemlegefaplady
clpfaeiksfirealhssplgpqthcvhgcglwnngrlqvyhedvgrhnavdkvlgsill
grasnnsavyttgrltsdmvlkcarigipiimsrtspsslglalakrsgatlvaysrper
invfnaperil

Sequence, based on observed residues (ATOM records): (download)

>d2pw9a1 c.97.1.5 (A:7-257) Uncharacterized protein DP1777 {Desulfotalea psychrophila [TaxId: 84980]}
plsimqksvvirpggrqemdehvaietpyaialndrvigssmvlpvdleefgagflfgqg
yikkaeeireilvcpqgrisvyadkipkemleefapladyclpfaeiksfirealhsspl
gpqthcvhgcglwnngrlqvyhedvgrhnavdkvlgsillgrasnnsavyttgrltsdmv
lkcarigipiimsrtspsslglalakrsgatlvaysrperinvfnaperil

SCOPe Domain Coordinates for d2pw9a1:

Click to download the PDB-style file with coordinates for d2pw9a1.
(The format of our PDB-style files is described here.)

Timeline for d2pw9a1: