SCOPe 2.02: Domain d2ppdc1: 2ppd C:12-164

Lineage for d2ppdc1 (2ppd C:12-164)

1. Root: SCOPe 2.02

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands

4. Superfamily b.6.1: Cupredoxins [49503] (8 families)
   contains copper-binding site

5. Family b.6.1.3: Multidomain cupredoxins [49550] (7 proteins)

6. Protein Nitrite reductase, NIR [49551] (5 species)
   consists of two domains of this fold

7. Species Alcaligenes faecalis, strain s-6 [TaxId:511] [49553] (37 PDB entries)
   Uniprot P38501

8. Domain d2ppdc1: 2ppd C:12-164 [149767]
   automatically matched to d1ndra1
   complexed with act, cu, cu1, no, trs; mutant

Details for d2ppdc1

PDB Entry: 2ppd, 1.8 Å

PDB Description: oxidized h145a mutant of afnir bound to nitric oxide

PDB Compounds: (C:) Copper-containing nitrite reductase

SCOPe Domain Sequences for d2ppdc1:

Sequence; same for both SEQRES and ATOM records:

>d2ppdc1 b.6.1.3 (C:12-164) Nitrite reductase, NIR {Alcaligenes faecalis, strain s-6 [TaxId: 511]}
lprqkvelvdppfvhahsqvaeggpkvveftmvieekkividdagtevhamafngtvpgp
lmvvhqddyleltlinpetntlmhnidfhaatgalgggglteinpgektilrfkatkpgv
fvyhcappgmvpwavvsgmngaimvlpreglhd

Timeline for d2ppdc1:

• d2ppdc1 first appeared in SCOP 1.75
  
• d2ppdc1 appears in SCOPe 2.01
  
• d2ppdc1 appears in SCOPe 2.03
  
• d2ppdc1 appears in the current release, SCOPe 2.08