Lineage for d2pg4a1 (2pg4 A:1-92)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983343Family a.4.5.48: F93-like [109674] (4 protein domains)
    contains long helix in the C-terminal extension; forms dimer similar to the RTP and LysR dimers
  6. 1983351Protein Uncharacterized protein APE0880.1 [158290] (1 species)
  7. 1983352Species Aeropyrum pernix [TaxId:56636] [158291] (1 PDB entry)
    Uniprot Q9YDN4 1-92
  8. 1983353Domain d2pg4a1: 2pg4 A:1-92 [149455]
    complexed with cit, cl, edo, peg

Details for d2pg4a1

PDB Entry: 2pg4 (more details), 2.21 Å

PDB Description: Crystal structure of a putative dna binding protein (ape_0880a) from aeropyrum pernix k1 at 2.21 A resolution
PDB Compounds: (A:) Uncharacterized protein

SCOPe Domain Sequences for d2pg4a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2pg4a1 a.4.5.48 (A:1-92) Uncharacterized protein APE0880.1 {Aeropyrum pernix [TaxId: 56636]}

SCOPe Domain Coordinates for d2pg4a1:

Click to download the PDB-style file with coordinates for d2pg4a1.
(The format of our PDB-style files is described here.)

Timeline for d2pg4a1: