SCOPe 2.08: Domain d2pb9b_: 2pb9 B:

Lineage for d2pb9b_ (2pb9 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.74: AraD/HMP-PK domain-like [53638] (1 superfamily)
   3 layers: a/b/a; mixed (mostly antiparallel) beta-sheet of 9 strands, order 432159876; left-handed crossover between strands 4 and 5

4. Superfamily c.74.1: AraD/HMP-PK domain-like [53639] (3 families)

5. Family c.74.1.2: Phosphomethylpyrimidine kinase C-terminal domain-like [159768] (2 proteins)
   automatically mapped to Pfam PF10120

6. Protein Phosphomethylpyrimidine kinase [159769] (1 species)

7. Species Pyrococcus furiosus [TaxId:2261] [159770] (1 PDB entry)
   Uniprot Q8U193 268-451

8. Domain d2pb9b_: 2pb9 B: [149353]
   automated match to d2pb9a1
   complexed with po4

Details for d2pb9b_

PDB Entry: 2pb9, 2.7 Å

PDB Description: crystal structure of c-terminal domain of phosphomethylpyrimidine kinase

PDB Compounds: (B:) phosphomethylpyrimidine kinase

SCOPe Domain Sequences for d2pb9b_:

Sequence; same for both SEQRES and ATOM records:

>d2pb9b_ c.74.1.2 (B:) Phosphomethylpyrimidine kinase {Pyrococcus furiosus [TaxId: 2261]}
ekwriyeeltnavrefesinpvrlipevgtnfvyslplpyarstkdvagvkgrivkygns
vkavgpvefgasdhlaravltymrfypeyrsainirysreiieeiieiaqergfkvsfyd
rreepeeikakegatipwgietaikrikerpdiiyhlgdvgkepmilvfgrnprevleki
kmli

Timeline for d2pb9b_:

• d2pb9b_ first appeared in SCOP 1.75, called d2pb9b1
  
• d2pb9b_ appears in SCOPe 2.07