SCOPe 2.08: Domain d2p2ub_: 2p2u B:

Lineage for d2p2ub_ (2p2u B:)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
   this is not a true fold; contains at least two very long antiparallel helices

4. Superfamily h.4.18: Gam-like [161266] (1 family)
   homodimeric fold with a ring-like structure formed by kinked coiled-coil and a beta-ribboon, interrupted by small helical insertions

5. Family h.4.18.1: Gam-like [161267] (1 protein)
   Pfam PF07352; Bacteriophage Mu Gam-like protein

6. Protein Host-nuclease inhibitor protein Gam, putative [161268] (1 species)

7. Species Desulfovibrio vulgaris [TaxId:881] [161269] (1 PDB entry)
   Uniprot Q72CZ5 9-161

8. Domain d2p2ub_: 2p2u B: [149174]
   automated match to d2p2ua1

Details for d2p2ub_

PDB Entry: 2p2u, 2.75 Å

PDB Description: crystal structure of putative host-nuclease inhibitor protein gam from desulfovibrio vulgaris

PDB Compounds: (B:) Host-nuclease inhibitor protein Gam, putative

SCOPe Domain Sequences for d2p2ub_:

Sequence, based on SEQRES records:

>d2p2ub_ h.4.18.1 (B:) Host-nuclease inhibitor protein Gam, putative {Desulfovibrio vulgaris [TaxId: 881]}
vivadirqaegalaeiatidrkvgeieaqmneaidaakarasqksapllarrkeledgva
tfatlnktemfkdrksldlgfgtigfrlstqivqmskitkdmtlerlrqfgisegirike
dvnkeamqgwpderlemvglkrrttdafyieinreev

Sequence, based on observed residues (ATOM records):

>d2p2ub_ h.4.18.1 (B:) Host-nuclease inhibitor protein Gam, putative {Desulfovibrio vulgaris [TaxId: 881]}
vivadirqaegalaeiatidrkvgeieaqmneaidaakarasqksapllarrkeledgva
tfatlnktemfsldlgfgtigfrlstqivqmskitkdmtlerlrqfgisegirikedvnk
eamqgwpderlemvglkrrttdafyieinreev

Timeline for d2p2ub_:

• d2p2ub_ first appeared in SCOP 1.75, called d2p2ub1
  
• d2p2ub_ appears in SCOPe 2.07