SCOP 1.75: Domain d2p1rb1: 2p1r B:1-299

Lineage for d2p1rb1 (2p1r B:1-299)

1. Root: SCOP 1.75

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.52: NAD kinase/diacylglycerol kinase-like [111330] (1 superfamily)
   2 domains: d1 [alpha/beta; related to the PFK N-terminal domain ((53784))]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
   2 domains: d1 [alpha/beta; related to the PFK N-terminal domain ((53784))]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]

4. Superfamily e.52.1: NAD kinase/diacylglycerol kinase-like [111331] (2 families)

5. Family e.52.1.2: Diacylglycerol kinase-like [160984] (2 proteins)
   N-terminal, catalytic domain is covered by Pfam PF00781

6. Protein Lipid kinase YegS [160985] (2 species)

7. Species Salmonella typhimurium [TaxId:90371] [160986] (1 PDB entry)
   Uniprot Q8ZNP1 1-299

8. Domain d2p1rb1: 2p1r B:1-299 [149162]
   automatically matched to 2P1R A:1-299
   complexed with ca, cl, na

Details for d2p1rb1

PDB Entry: 2p1r, 2.5 Å

PDB Description: crystal structure of salmonella typhimurium yegs, a putative lipid kinase homologous to eukaryotic sphingosine and diacylglycerol kinases.

PDB Compounds: (B:) Lipid kinase yegS

SCOP Domain Sequences for d2p1rb1:

Sequence, based on SEQRES records:

>d2p1rb1 e.52.1.2 (B:1-299) Lipid kinase YegS {Salmonella typhimurium [TaxId: 90371]}
manfpasllilngksadnqplreaitllrdegiqihvrvtwekgdaqryvdearrlgvet
viagggdgtinevstaliqirdgvapalgllplgtandfatsagipealdkalklaiagn
ameidmamvndktcfinmatggfgtrittetpeklkaalggvsylihglmrmdtltpdrc
eirgenfhwqgdalvigigngrqagggqqlcptalindgllqlriftgeellpalfstlt
qsddnpniidgasawfdihapheitfnldgeplsgqefhievlpgalrcrlppdcpllr

Sequence, based on observed residues (ATOM records):

>d2p1rb1 e.52.1.2 (B:1-299) Lipid kinase YegS {Salmonella typhimurium [TaxId: 90371]}
manfpasllilngksadnqplreaitllrdegiqihvrvtwekgdaqryvdearrlgvet
viagggdgtinevstaliqirdgvapalgllplgtandfatsagipealdkalklaiagn
ameidmamvndktcfinmatggfgtrittlggvsylihglmrmdtltpdrceirgenfhw
qgdalvigigngrqagggqqlcptalindgllqlriftgeellpalfstltqsddnpnii
dgasawfdihapheitfnldgeplsgqefhievlpgalrcrlppdcpllr

Timeline for d2p1rb1:

• d2p1rb1 is new in SCOP 1.75
  
• d2p1rb1 appears in SCOPe 2.01
  
• d2p1rb1 appears in the current release, SCOPe 2.08, called d2p1rb_