SCOPe 2.08: Domain d2oz0a1: 2oz0 A:98-510

Lineage for d2oz0a1 (2oz0 A:98-510)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
   Uniprot P00175
   N-terminal domain homologous to cytochrome b5

8. Domain d2oz0a1: 2oz0 A:98-510 [149083]
   Other proteins in same PDB: d2oz0a2
   automated match to d1kbia1
   complexed with fmn, hem, pyr
   has additional subdomain(s) that are not in the common domain
   has additional insertions and/or extensions that are not grouped together

Details for d2oz0a1

PDB Entry: 2oz0, 2.8 Å

PDB Description: mechanistic and structural studies of h373q flavocytochrome b2: effects of mutating the active site base

PDB Compounds: (A:) Cytochrome b2

SCOPe Domain Sequences for d2oz0a1:

Sequence, based on SEQRES records:

>d2oz0a1 c.1.4.1 (A:98-510) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdiee
lkkktklpivikgvqrtedvikaaeigvsgvvlsnqggrqldfsrapievlaetmpileq
rnlkdklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrde
iemsmrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefed

Sequence, based on observed residues (ATOM records):

>d2oz0a1 c.1.4.1 (A:98-510) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsngasralskfidpsltwkdieelkkktklpivikgvqrt
edvikaaeigvsgvvlsnqggrqldfsrapievlaetmpileqrnlkdklevfvdggvrr
gtdvlkalclgakgvglgrpflyanscygrngvekaieilrdeiemsmrllgvtsiaelk
pdlldlstlkartvgvpndvlynevyegptltefed

Timeline for d2oz0a1:

• d2oz0a1 first appeared in SCOP 1.75
  
• d2oz0a1 appears in SCOPe 2.07