SCOPe 2.08: Domain d2orbi_: 2orb I:

Lineage for d2orbi_ (2orb I:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein automated matches [190119] (24 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [186842] (622 PDB entries)

8. Domain d2orbi_: 2orb I: [149002]
   Other proteins in same PDB: d2orbl2, d2orbm2
   automated match to d6shgh_
   complexed with so4

Details for d2orbi_

PDB Entry: 2orb, 2.2 Å

PDB Description: The structure of the anti-c-myc antibody 9E10 Fab fragment

PDB Compounds: (I:) Monoclonal anti-c-myc antibody 9E10

SCOPe Domain Sequences for d2orbi_:

Sequence, based on SEQRES records:

>d2orbi_ b.1.1.1 (I:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
evhlvesggdlvkpggslklscaasgftfshygmswvrqtpdkrlewvatigsrgtythy
pdsvkgrftisrdndknalylqmnslksedtamyycarrsefyyygntyyysamdywgqg
asvtvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtf
pavlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprd

Sequence, based on observed residues (ATOM records):

>d2orbi_ b.1.1.1 (I:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
evhlvesggdlvkpggslklscaasgftfshygmswvrqtpdkrlewvatigsrgtythy
pdsvkgrftisrdndknalylqmnslksedtamyycarrsamdywgqgasvtvssakttp
psvyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvps
stwpsetvtcnvahpasstkvdkkivprd

Timeline for d2orbi_:

• d2orbi_ first appeared in SCOP 1.75, called d2orbi1
  
• d2orbi_ was called d2orbi1 in SCOPe 2.07