SCOPe 2.05: Domain d2ooda1: 2ood A:3-72,A:398-467

Lineage for d2ooda1 (2ood A:3-72,A:398-467)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.92: Composite domain of metallo-dependent hydrolases [51337] (1 superfamily)
   pseudobarrel; mixed sheet of 7 strand folded upon itself and "buckled" by two beta-turns

4. Superfamily b.92.1: Composite domain of metallo-dependent hydrolases [51338] (12 families)
   this domain is interrupted by the catalytic beta/alpha barrel domain

5. Family b.92.1.4: SAH/MTA deaminase-like [82224] (3 proteins)

6. Protein Guanine deaminase [159336] (3 species)

7. Species Bradyrhizobium japonicum [TaxId:375] [159337] (1 PDB entry)
   Uniprot Q89NG0 1-70,396-465
   Blr3880

8. Domain d2ooda1: 2ood A:3-72,A:398-467 [148921]
   Other proteins in same PDB: d2ooda2
   complexed with gun, zn

Details for d2ooda1

PDB Entry: 2ood, 2.62 Å

PDB Description: crystal structure of guanine deaminase from bradyrhizobium japonicum

PDB Compounds: (A:) Blr3880 protein

SCOPe Domain Sequences for d2ooda1:

Sequence, based on SEQRES records:

>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}
lttvgirgtffdfvddpwkhigneqaaarfhqdglmvvtdgvikafgpyekiaaahpgve
ithikdriivXfepgkeadfvaldpnggqlaqpwhqsliadgagprtvdeaasmlfavmm
vgddrcvdetwvmgkrlykks

Sequence, based on observed residues (ATOM records):

>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}
lttvgirgtffdfvddpwkhigneqaaarfhqdglmvvtdgvikafgpyekiaaahpgve
ithikdriivXfepgkeadfvaldpnggqlaqpwhqsligagprtvdeaasmlfavmmvg
ddrcvdetwvmgkrlykks

Timeline for d2ooda1:

• d2ooda1 first appeared in SCOP 1.75
  
• d2ooda1 appears in SCOPe 2.04
  
• d2ooda1 appears in SCOPe 2.06
  
• d2ooda1 appears in the current release, SCOPe 2.08