Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (2 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.2: RNA-polymerase beta-prime [64490] (2 proteins) |
Protein RNA-polymerase beta-prime [64493] (2 species) |
Species Thermus thermophilus [TaxId:274] [75610] (13 PDB entries) Uniprot Q8RQE8; part of multichain biological unit |
Domain d2o5id1: 2o5i D:2-1505 [148601] Other proteins in same PDB: d2o5ic_, d2o5ie_, d2o5im_, d2o5io_ automatically matched to d1iw7d_ protein/DNA complex; protein/RNA complex; complexed with mg, zn |
PDB Entry: 2o5i (more details), 2.5 Å
SCOPe Domain Sequences for d2o5id1:
Sequence, based on SEQRES records: (download)
>d2o5id1 e.29.1.2 (D:2-1505) RNA-polymerase beta-prime {Thermus thermophilus [TaxId: 274]} kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacg kykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsat eleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkd geevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgei laelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekg qplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarv eagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvl adggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleem khpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdln dlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplr sltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkm eekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlv egqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakp srdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlky vfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliq ldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekk qyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnply vmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkgg adtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradie aglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvc qkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtggvagaaditqglprvie lfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyvea gqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvev tdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfq ntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearke avea
>d2o5id1 e.29.1.2 (D:2-1505) RNA-polymerase beta-prime {Thermus thermophilus [TaxId: 274]} kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacg kykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsat eleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkd geevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladg gkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhp srarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndly rrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrslt dilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeek giapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegq siqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrd iilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfa npdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldv pqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyl eeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvma qsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadt alrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieagl ygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkc ygydlsmarpvsigeavgivaaqsigepgtqlglprvielfearrpkakaviseidgvvr ieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpe averylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvea lnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeligl kenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea
Timeline for d2o5id1: