Lineage for d2nyqa_ (2nyq A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2887810Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2889494Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) (S)
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
  5. 2889724Family c.56.5.4: Bacterial dinuclear zinc exopeptidases [53204] (18 proteins)
  6. 2889845Protein automated matches [190049] (2 species)
    not a true protein
  7. 2889853Species Vibrio proteolyticus [TaxId:671] [186859] (5 PDB entries)
  8. 2889858Domain d2nyqa_: 2nyq A: [148517]
    automated match to d1ampa_
    complexed with zn

Details for d2nyqa_

PDB Entry: 2nyq (more details), 2.5 Å

PDB Description: structure of vibrio proteolyticus aminopeptidase with a bound trp fragment of dlwcf
PDB Compounds: (A:) aminopeptidase

SCOPe Domain Sequences for d2nyqa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nyqa_ c.56.5.4 (A:) automated matches {Vibrio proteolyticus [TaxId: 671]}
mppitqqatvtawlpqvdasqitgtisslesftnrfytttsgaqasdwiasewqalsasl
pnasvkqvshsgynqksvvmtitgseapdewivigghldstigshtneqsvapgadddas
giaavtevirvlsennfqpkrsiafmayaaeevglrgsqdlanqyksegknvvsalqldm
tnykgsaqdvvfitdytdsnftqyltqlmdeylpsltygfdtcgyacsdhaswhnagypa
ampfeskfndynprihttqdtlansdptgshakkftqlglayaiemgsatg

SCOPe Domain Coordinates for d2nyqa_:

Click to download the PDB-style file with coordinates for d2nyqa_.
(The format of our PDB-style files is described here.)

Timeline for d2nyqa_: