Lineage for d2nn6i1 (2nn6 I:61-185)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2397497Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2398897Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2399296Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (32 proteins)
    barrel, closed; n=5, S=8
  6. 2399384Protein Exosome component 1, EXOSC1 [159098] (1 species)
    3'-5' exoribonuclease CSL4 homolog
  7. 2399385Species Human (Homo sapiens) [TaxId:9606] [159099] (1 PDB entry)
    Uniprot Q9Y3B2 61-185
  8. 2399386Domain d2nn6i1: 2nn6 I:61-185 [148313]
    Other proteins in same PDB: d2nn6a1, d2nn6a2, d2nn6b1, d2nn6b2, d2nn6c1, d2nn6c2, d2nn6d1, d2nn6d2, d2nn6e1, d2nn6e2, d2nn6f1, d2nn6f2, d2nn6g1, d2nn6g2, d2nn6g3, d2nn6h1, d2nn6h2, d2nn6h3, d2nn6i2
    includes extra C-terminal subdomain of a rubredoxin-like fold that is lacking the zinc-binding residues
    protein/RNA complex

Details for d2nn6i1

PDB Entry: 2nn6 (more details), 3.35 Å

PDB Description: Structure of the human RNA exosome composed of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, and Rrp40
PDB Compounds: (I:) 3'-5' exoribonuclease CSL4 homolog

SCOPe Domain Sequences for d2nn6i1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d2nn6i1:

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Timeline for d2nn6i1: