SCOPe 2.07: Domain d2nn6g3: 2nn6 G:195-274

Lineage for d2nn6g3 (2nn6 G:195-274)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.51: Eukaryotic type KH-domain (KH-domain type I) [54790] (1 superfamily)
   beta-alpha(2)-beta(2)-alpha; 2 layers: alpha/beta

4. Superfamily d.51.1: Eukaryotic type KH-domain (KH-domain type I) [54791] (2 families)
   Prokaryotic and eukaryotic domains share a KH-motif but have different topologies

5. Family d.51.1.1: Eukaryotic type KH-domain (KH-domain type I) [54792] (17 proteins)
   an RNA-binding domain

6. Protein Ribosomal RNA-processing protein 40, RRP40 [160233] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [160235] (1 PDB entry)
   Uniprot Q9NQT5 196-275

8. Domain d2nn6g3: 2nn6 G:195-274 [148309]
   Other proteins in same PDB: d2nn6a1, d2nn6a2, d2nn6b1, d2nn6b2, d2nn6c1, d2nn6c2, d2nn6d1, d2nn6d2, d2nn6e1, d2nn6e2, d2nn6f1, d2nn6f2, d2nn6g1, d2nn6g2, d2nn6h1, d2nn6h2, d2nn6h3, d2nn6i1, d2nn6i2
   protein/RNA complex

Details for d2nn6g3

PDB Entry: 2nn6, 3.35 Å

PDB Description: Structure of the human RNA exosome composed of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, and Rrp40

PDB Compounds: (G:) exosome complex exonuclease rrp40

SCOPe Domain Sequences for d2nn6g3:

Sequence; same for both SEQRES and ATOM records:

>d2nn6g3 d.51.1.1 (G:195-274) Ribosomal RNA-processing protein 40, RRP40 {Human (Homo sapiens) [TaxId: 9606]}
dgllfkvtlglirkllapdceiiqevgklypleivfgmngriwvkaktiqqtlilanile
acehmtsdqrkqifsrlaes

Timeline for d2nn6g3:

• d2nn6g3 first appeared in SCOP 1.75
  
• d2nn6g3 appears in SCOPe 2.06
  
• d2nn6g3 appears in the current release, SCOPe 2.08