Lineage for d2nn6g2 (2nn6 G:16-106)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2072005Fold b.84: Barrel-sandwich hybrid [51229] (5 superfamilies)
    sandwich of half-barrel shaped beta-sheets
  4. 2072313Superfamily b.84.4: Ribosomal L27 protein-like [110324] (3 families) (S)
    rudiment single hybrid fold with a permuted topology
  5. 2072364Family b.84.4.2: ECR1 N-terminal domain-like [159324] (4 protein domains)
    ECR1 - Exosome complex RNA-binding protein 1
  6. 2072381Protein Ribosomal RNA-processing protein 40, RRP40 [159325] (1 species)
  7. 2072382Species Human (Homo sapiens) [TaxId:9606] [159326] (1 PDB entry)
    Uniprot Q9NQT5 17-107
  8. 2072383Domain d2nn6g2: 2nn6 G:16-106 [148308]
    Other proteins in same PDB: d2nn6a1, d2nn6a2, d2nn6b1, d2nn6b2, d2nn6c1, d2nn6c2, d2nn6d1, d2nn6d2, d2nn6e1, d2nn6e2, d2nn6f1, d2nn6f2, d2nn6g1, d2nn6g3, d2nn6h1, d2nn6h2, d2nn6h3, d2nn6i1, d2nn6i2
    protein/RNA complex

Details for d2nn6g2

PDB Entry: 2nn6 (more details), 3.35 Å

PDB Description: Structure of the human RNA exosome composed of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, and Rrp40
PDB Compounds: (G:) exosome complex exonuclease rrp40

SCOPe Domain Sequences for d2nn6g2:

Sequence, based on SEQRES records: (download)

>d2nn6g2 b.84.4.2 (G:16-106) Ribosomal RNA-processing protein 40, RRP40 {Human (Homo sapiens) [TaxId: 9606]}
araartvlgqvvlpgeelllpeqedaegpggaverplslnaracsrvrvvcgpglrrcgd
rllvtkcgrlrhkepgsgsgggvywvdsqqk

Sequence, based on observed residues (ATOM records): (download)

>d2nn6g2 b.84.4.2 (G:16-106) Ribosomal RNA-processing protein 40, RRP40 {Human (Homo sapiens) [TaxId: 9606]}
araartvlgqvvlpgeelllpeqedaegpggavergdrllvtkcgrlrhkepgsgsgggv
ywvdsqqk

SCOPe Domain Coordinates for d2nn6g2:

Click to download the PDB-style file with coordinates for d2nn6g2.
(The format of our PDB-style files is described here.)

Timeline for d2nn6g2: