SCOPe 2.08: Domain d2k6db2: 2k6d B:1-75

Lineage for d2k6db2 (2k6d B:1-75)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d2k6db2: 2k6d B:1-75 [148276]
   Other proteins in same PDB: d2k6da_, d2k6db3
   automated match to d3rula_

Details for d2k6db2

PDB Entry: 2k6d

PDB Description: cin85 sh3-c domain in complex with ubiquitin

PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d2k6db2:

Sequence; same for both SEQRES and ATOM records:

>d2k6db2 d.15.1.1 (B:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

Timeline for d2k6db2:

• d2k6db2 first appeared in SCOP 1.75, called d2k6db1
  
• d2k6db2 appears in SCOPe 2.07