Lineage for d2k6db2 (2k6d B:1-75)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (8 species)
  7. 2158532Species Human (Homo sapiens) [TaxId:9606] [54239] (202 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2158822Domain d2k6db2: 2k6d B:1-75 [148276]
    Other proteins in same PDB: d2k6da_, d2k6db3
    automated match to d3rula_

Details for d2k6db2

PDB Entry: 2k6d (more details)

PDB Description: CIN85 Sh3-C domain in complex with ubiquitin
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d2k6db2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2k6db2 d.15.1.1 (B:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

SCOPe Domain Coordinates for d2k6db2:

Click to download the PDB-style file with coordinates for d2k6db2.
(The format of our PDB-style files is described here.)

Timeline for d2k6db2:

View in 3D
Domains from same chain:
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d2k6db3
View in 3D
Domains from other chains:
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d2k6da_