Lineage for d2jixd1 (2jix D:6-116)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2352460Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2352461Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2352672Protein Immunoglobulin heavy chain variable domain, VH [88543] (22 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2353659Species Synthetic construct [TaxId:32630] [158862] (3 PDB entries)
  8. 2353661Domain d2jixd1: 2jix D:6-116 [148111]
    Other proteins in same PDB: d2jixb1, d2jixb2, d2jixc1, d2jixc2, d2jixd2, d2jixd3, d2jixe1, d2jixe2, d2jixf2, d2jixf3, d2jixh2, d2jixh3
    automatically matched to d1h3ph1

Details for d2jixd1

PDB Entry: 2jix (more details), 3.2 Å

PDB Description: crystal structure of abt-007 fab fragment with the soluble domain of epo receptor
PDB Compounds: (D:) abt-007 fab fragment

SCOPe Domain Sequences for d2jixd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2jixd1 b.1.1.1 (D:6-116) Immunoglobulin heavy chain variable domain, VH {Synthetic construct [TaxId: 32630]}

SCOPe Domain Coordinates for d2jixd1:

Click to download the PDB-style file with coordinates for d2jixd1.
(The format of our PDB-style files is described here.)

Timeline for d2jixd1: