SCOPe 2.06: Domain d2jiwb2: 2jiw B:127-436

Lineage for d2jiwb2 (2jiw B:127-436)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
   Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain

6. Protein automated matches [254553] (2 species)
   not a true protein

7. Species Bacteroides thetaiotaomicron [TaxId:226186] [255268] (4 PDB entries)

8. Domain d2jiwb2: 2jiw B:127-436 [148105]
   Other proteins in same PDB: d2jiwa1, d2jiwa3, d2jiwb1, d2jiwb3
   automated match to d2choa2
   complexed with beu

Details for d2jiwb2

PDB Entry: 2jiw, 1.95 Å

PDB Description: bacteroides thetaiotaomicron gh84 o-glcnacase in complex with 2-acetylamino-2-deoxy-1-epivalienamine

PDB Compounds: (B:) o-glcnacase bt_4395

SCOPe Domain Sequences for d2jiwb2:

Sequence; same for both SEQRES and ATOM records:

>d2jiwb2 c.1.8.10 (B:127-436) automated matches {Bacteroides thetaiotaomicron [TaxId: 226186]}
vryrgvvegfygtpwshqarlsqlkfygknkmntyiygpkddpyhsapnwrlpypdkeaa
qlqelvavanenevdfvwaihpgqdikwnkedrdlllakfekmyqlgvrsfavffddisg
egtnpqkqaellnyidekfaqvkpdinqlvmcpteynkswsnpngnylttlgdklnpsiq
imwtgdrvisditrdgiswinerikrpayiwwnfpvsdyvrdhlllgpvygndttiakem
sgfvtnpmehaesskiaiysvasyawnpakydtwqtwkdairtilpsaaeelecfamhns
dlgpnghgyr

Timeline for d2jiwb2:

• d2jiwb2 first appeared in SCOP 1.75
  
• d2jiwb2 appears in SCOPe 2.05
  
• d2jiwb2 appears in SCOPe 2.07
  
• d2jiwb2 appears in the current release, SCOPe 2.08