Lineage for d2jira2 (2jir A:4-600)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2908420Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
    contains of two similar intertwined domains related by pseudo dyad; duplication
    core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451
  4. 2908421Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (2 families) (S)
    molybdopterine enzyme
  5. 2908422Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
    domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
  6. 2908465Protein Periplasmic nitrate reductase alpha chain [53717] (2 species)
  7. 2908466Species Desulfovibrio desulfuricans [TaxId:876] [53718] (5 PDB entries)
    dissimilatory nitrate reductase (NAP)
  8. 2908467Domain d2jira2: 2jir A:4-600 [148100]
    Other proteins in same PDB: d2jira1
    automated match to d2napa2
    complexed with cyn, mgd, mo, no2, sf4

Details for d2jira2

PDB Entry: 2jir (more details), 2.35 Å

PDB Description: a new catalytic mechanism of periplasmic nitrate reductase from desulfovibrio desulfuricans atcc 27774 from crystallographic and epr data and based on detailed analysis of the sixth ligand
PDB Compounds: (A:) periplasmic nitrate reductase

SCOPe Domain Sequences for d2jira2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2jira2 c.81.1.1 (A:4-600) Periplasmic nitrate reductase alpha chain {Desulfovibrio desulfuricans [TaxId: 876]}

SCOPe Domain Coordinates for d2jira2:

Click to download the PDB-style file with coordinates for d2jira2.
(The format of our PDB-style files is described here.)

Timeline for d2jira2:

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