SCOP 1.75: Domain d2ji6b1: 2ji6 B:195-369

Lineage for d2ji6b1 (2ji6 B:195-369)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like

4. Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (6 families)
   binds cofactor molecules in the opposite direction than classical Rossmann fold

5. Family c.31.1.3: Pyruvate oxidase and decarboxylase, middle domain [52475] (8 proteins)
   N-terminal domain is Pyr module, and C-terminal domain is PP module of thiamin diphosphate-binding fold

6. Protein Oxalyl-CoA decarboxylase [142124] (1 species)

7. Species Oxalobacter formigenes [TaxId:847] [142125] (6 PDB entries)
   Uniprot P40149 195-369

8. Domain d2ji6b1: 2ji6 B:195-369 [148059]
   Other proteins in same PDB: d2ji6a2, d2ji6a3, d2ji6b2, d2ji6b3
   automatically matched to d2c31a1
   complexed with adp, b3p, mg, oxk, pge, tpw

Details for d2ji6b1

PDB Entry: 2ji6, 2.06 Å

PDB Description: x-ray structure of oxalyl-coa decarboxylase in complex with 3-deaza- thdp and oxalyl-coa

PDB Compounds: (B:) oxalyl-coa decarboxylase

SCOP Domain Sequences for d2ji6b1:

Sequence; same for both SEQRES and ATOM records:

>d2ji6b1 c.31.1.3 (B:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
aqipaedaiaraadliknakrpvimlgkgaayaqcddeiralveetgipflpmgmakgll
pdnhpqsaaatrafalaqcdvcvligarlnwlmqhgkgktwgdelkkyvqidiqanemds
nqpiaapvvgdiksavsllrkalkgapkadaewtgalkakvdgnkaklagkmtae

Timeline for d2ji6b1:

• d2ji6b1 is new in SCOP 1.75
  
• d2ji6b1 appears in SCOPe 2.01
  
• d2ji6b1 appears in the current release, SCOPe 2.08