Lineage for d2ja9a1 (2ja9 A:62-151)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2789270Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2789672Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (36 proteins)
    barrel, closed; n=5, S=8
  6. 2790128Protein S1-domain of exosome component 3 (RRP40) [159091] (2 species)
  7. 2790129Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [159092] (1 PDB entry)
    Uniprot Q08285 62-151
  8. 2790130Domain d2ja9a1: 2ja9 A:62-151 [147950]
    Other proteins in same PDB: d2ja9a2

Details for d2ja9a1

PDB Entry: 2ja9 (more details), 2.2 Å

PDB Description: structure of the n-terminal deletion of yeast exosome component rrp40
PDB Compounds: (A:) exosome complex exonuclease rrp40

SCOPe Domain Sequences for d2ja9a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ja9a1 b.40.4.5 (A:62-151) S1-domain of exosome component 3 (RRP40) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2ja9a1:

Click to download the PDB-style file with coordinates for d2ja9a1.
(The format of our PDB-style files is described here.)

Timeline for d2ja9a1:

View in 3D
Domains from same chain:
(mouse over for more information)