SCOP 1.75: Domain d2iveb1: 2ive B:10-306,B:415-464

Lineage for d2iveb1 (2ive B:10-306,B:415-464)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
   core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander

4. Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (8 families)

5. Family c.3.1.2: FAD-linked reductases, N-terminal domain [51913] (18 proteins)
   C-terminal domain is alpha+beta is common for the family

6. Protein Protoporphyrinogen oxidase [102183] (2 species)

7. Species Myxococcus xanthus [TaxId:34] [159429] (2 PDB entries)
   Uniprot P56601 10-306,415-464

8. Domain d2iveb1: 2ive B:10-306,B:415-464 [147811]
   Other proteins in same PDB: d2ivea2, d2iveb2
   automatically matched to 2IVD A:10-306,A:415-464
   complexed with fad, gol, twn

Details for d2iveb1

PDB Entry: 2ive, 2.7 Å

PDB Description: structure of protoporphyrinogen oxidase from myxococcus xanthus

PDB Compounds: (B:) protoporphyrinogen oxidase

SCOP Domain Sequences for d2iveb1:

Sequence, based on SEQRES records:

>d2iveb1 c.3.1.2 (B:10-306,B:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
mnvavvgggisglavahhlrsrgtdavllessarlggavgthalagylveqgpnsfldre
patralaaalnlegriraadpaakrryvytrgrlrsvpasppaflasdilplgarlrvag
elfsrrapegvdeslaafgrrhlghratqvlldavqtgiyagdveqlsvaatfpmlvkme
rehrslilgairaqkaqrqaalpagtapklsgalstfdgglqvlidalaaslgdaahvga
rveglaredggwrliieehgrraelsvaqvvlaapahatakllrplddalaalvagiXyn
lghlervaaidaalqrlpglhlignaykgvglndcirnaaqladalva

Sequence, based on observed residues (ATOM records):

>d2iveb1 c.3.1.2 (B:10-306,B:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
mnvavvgggisglavahhlrsrgtdavllessarlggavgthalagylveqgpnsfldre
patralaaalnlegriraadpaakrryvytrgrlrsvpasppaflasdilplgarlrvag
elfsrrapegvdeslaafgrrhlghratqvlldavqtgiyagdveqlsvaatfpmlvkme
rehrslilgairaqkaqrqapklsgalstfdgglqvlidalaaslgdaahvgarveglar
edggwrliieehgrraelsvaqvvlaapahatakllrplddalaalvagiXynlghlerv
aaidaalqrlpglhlignaykgvglndcirnaaqladalva

Timeline for d2iveb1:

• d2iveb1 is new in SCOP 1.75
  
• d2iveb1 appears in SCOPe 2.01
  
• d2iveb1 appears in the current release, SCOPe 2.08