SCOPe 2.07: Domain d2ioub1: 2iou B:5-170

Lineage for d2ioub1 (2iou B:5-170)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.163: Pseudo beta-prism I [141657] (1 superfamily)
   beta-sandwich with one regular beta-sheet and the other beta-sheet bent in the middle with a set of aligned beta-bulges

4. Superfamily b.163.1: Bacteriophage trimeric proteins domain [141658] (2 families)
   found in phage proteins that form trimers, but is not involved in the trimerisation

5. Family b.163.1.1: Mtd domain-like [141659] (1 protein)

6. Protein Major tropism determinant (Mtd), N-terminal domain [141660] (1 species)
   includes extra N-terminal trimerization domain; beta-alpha-beta(3)

7. Species Bordetella phage bpp-1 [TaxId:194699] [141661] (6 PDB entries)
   Uniprot Q775D6 5-170
   includes other related Bordetella phages

8. Domain d2ioub1: 2iou B:5-170 [147752]
   Other proteins in same PDB: d2ioua2, d2ioub2, d2iouc2, d2ioud2, d2ioue2, d2iouf2, d2ioug_, d2iouh_
   automated match to d1yu0a1
   complexed with mg

Details for d2ioub1

PDB Entry: 2iou, 3.16 Å

PDB Description: major tropism determinant p1 (mtd-p1) variant complexed with bordetella brochiseptica virulence factor pertactin extracellular domain (prn-e).

PDB Compounds: (B:) Major Tropism Determinant P1

SCOPe Domain Sequences for d2ioub1:

Sequence; same for both SEQRES and ATOM records:

>d2ioub1 b.163.1.1 (B:5-170) Major tropism determinant (Mtd), N-terminal domain {Bordetella phage bpp-1 [TaxId: 194699]}
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdi

Timeline for d2ioub1:

• d2ioub1 first appeared in SCOP 1.75
  
• d2ioub1 appears in SCOPe 2.06
  
• d2ioub1 appears in the current release, SCOPe 2.08